Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccrd_002513 | Ccrd_004749 | A0A103XR56 | A0A103XLZ1 | AT hook-like protein. | Lateral Root Primordium type 1, C-terminal. | 0.439 |
Ccrd_002513 | Ccrd_004992 | A0A103XR56 | A0A103XLG7 | AT hook-like protein. | Uncharacterized protein. | 0.407 |
Ccrd_002513 | Ccrd_005313 | A0A103XR56 | A0A118JUV3 | AT hook-like protein. | Transcription factor, TCP. | 0.427 |
Ccrd_002513 | Ccrd_006128 | A0A103XR56 | A0A124SBV5 | AT hook-like protein. | Uncharacterized protein. | 0.421 |
Ccrd_002513 | Ccrd_007230 | A0A103XR56 | A0A103XHF1 | AT hook-like protein. | Transcription factor, TCP. | 0.422 |
Ccrd_002513 | Ccrd_018325 | A0A103XR56 | A0A118K1X3 | AT hook-like protein. | Zinc finger, C2H2. | 0.413 |
Ccrd_002513 | Ccrd_018344 | A0A103XR56 | A0A103Y6E0 | AT hook-like protein. | Zinc finger, C2H2. | 0.428 |
Ccrd_002513 | Ccrd_020405 | A0A103XR56 | A0A103Y2J9 | AT hook-like protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.434 |
Ccrd_002513 | Ccrd_020473 | A0A103XR56 | A0A118K0C7 | AT hook-like protein. | Uncharacterized protein. | 0.449 |
Ccrd_002513 | Ccrd_022697 | A0A103XR56 | A0A103XY73 | AT hook-like protein. | Uncharacterized protein. | 0.406 |
Ccrd_004749 | Ccrd_002513 | A0A103XLZ1 | A0A103XR56 | Lateral Root Primordium type 1, C-terminal. | AT hook-like protein. | 0.439 |
Ccrd_004749 | Ccrd_004992 | A0A103XLZ1 | A0A103XLG7 | Lateral Root Primordium type 1, C-terminal. | Uncharacterized protein. | 0.424 |
Ccrd_004749 | Ccrd_005313 | A0A103XLZ1 | A0A118JUV3 | Lateral Root Primordium type 1, C-terminal. | Transcription factor, TCP. | 0.474 |
Ccrd_004749 | Ccrd_006128 | A0A103XLZ1 | A0A124SBV5 | Lateral Root Primordium type 1, C-terminal. | Uncharacterized protein. | 0.532 |
Ccrd_004749 | Ccrd_007230 | A0A103XLZ1 | A0A103XHF1 | Lateral Root Primordium type 1, C-terminal. | Transcription factor, TCP. | 0.537 |
Ccrd_004749 | Ccrd_018325 | A0A103XLZ1 | A0A118K1X3 | Lateral Root Primordium type 1, C-terminal. | Zinc finger, C2H2. | 0.439 |
Ccrd_004749 | Ccrd_020405 | A0A103XLZ1 | A0A103Y2J9 | Lateral Root Primordium type 1, C-terminal. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.490 |
Ccrd_004749 | Ccrd_022697 | A0A103XLZ1 | A0A103XY73 | Lateral Root Primordium type 1, C-terminal. | Uncharacterized protein. | 0.423 |
Ccrd_004992 | Ccrd_002513 | A0A103XLG7 | A0A103XR56 | Uncharacterized protein. | AT hook-like protein. | 0.407 |
Ccrd_004992 | Ccrd_004749 | A0A103XLG7 | A0A103XLZ1 | Uncharacterized protein. | Lateral Root Primordium type 1, C-terminal. | 0.424 |
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