STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_002415Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein. (252 aa)    
Predicted Functional Partners:
Ccrd_025529
Ankyrin repeat-containing protein.
  
  0.555
Ccrd_001920
Auxin responsive SAUR protein.
  
     0.494
Ccrd_025733
Uncharacterized protein.
  
 
   0.485
Ccrd_025510
Uncharacterized protein.
  
 
  0.485
Ccrd_023950
Uncharacterized protein.
  
 
  0.479
Ccrd_024115
Gnk2-homologous domain-containing protein.
  
 
  0.474
Ccrd_002900
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.470
Ccrd_003949
Uncharacterized protein.
  
  0.468
Ccrd_000670
DnaJ domain-containing protein.
  
     0.468
Ccrd_012765
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein.
  
    0.467
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.