STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_002120CID domain-containing protein. (1440 aa)    
Predicted Functional Partners:
Ccrd_002768
Cyclin C/H/T/L; Belongs to the cyclin family.
  
 
 0.821
Ccrd_006350
Cyclin C/H/T/L; Belongs to the cyclin family.
   
 
 0.782
Ccrd_020147
Cyclin C/H/T/L; Belongs to the cyclin family.
   
 
 0.782
Ccrd_016738
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.782
Ccrd_024362
Uncharacterized protein.
    
   0.705
Ccrd_018707
Uncharacterized protein.
    
   0.705
Ccrd_012239
Stigma-specific protein Stig1.
    
   0.705
Ccrd_008991
Sde2 N-terminal domain-containing protein.
      
 0.675
Ccrd_011258
Zinc finger, CCCH-type.
  
 
 
 0.636
Ccrd_005383
Post-SET domain-containing protein.
  
 
 
 0.610
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.