STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_001540Bulb-type lectin domain-containing protein. (189 aa)    
Predicted Functional Partners:
Ccrd_004582
Transcription factor, K-box.
  
  
  0.537
Ccrd_022162
Uncharacterized protein.
  
     0.525
Ccrd_010568
Uncharacterized protein.
  
 
  0.517
Ccrd_019615
Uncharacterized protein.
  
     0.511
Ccrd_026740
Uncharacterized protein.
  
     0.507
Ccrd_007627
Uncharacterized protein.
  
     0.507
Ccrd_012782
AAI domain-containing protein.
  
     0.505
Ccrd_013735
Uncharacterized protein.
  
     0.504
Ccrd_000604
Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein; Belongs to the plant LTP family.
  
     0.501
Ccrd_000038
F-box domain, cyclin-like protein.
  
     0.497
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.