STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_001417YAP-binding/Alf4/Glomulin. (556 aa)    
Predicted Functional Partners:
Ccrd_017155
BP28CT domain-containing protein.
   
 0.992
Ccrd_019333
WD_REPEATS_REGION domain-containing protein.
   
 0.987
Ccrd_013229
Nucleic acid-binding, OB-fold.
   
 0.987
Ccrd_017730
G-protein beta WD-40 repeat-containing protein.
   
 0.985
Ccrd_017699
Small-subunit processome, Utp14.
   
 0.985
Ccrd_025600
Uncharacterized protein.
   
 0.984
Ccrd_005607
Nrap protein.
   
 0.984
Ccrd_003975
BING4, C-terminal domain-containing protein.
   
 0.980
Ccrd_016483
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.979
Ccrd_010403
Uncharacterized protein.
   
 
 0.976
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.