Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Ccrd_001052Calcium/calmodulin-dependent/calcium-dependent protein kinase. (450 aa)    
Predicted Functional Partners:
Ccrd_014782
Dual specificity phosphatase, catalytic domain-containing protein.
    
 0.739
Ccrd_011949
Dual specificity phosphatase, catalytic domain-containing protein.
    
 0.739
Ccrd_012432
Dual specificity phosphatase, catalytic domain-containing protein.
    
 0.739
Ccrd_003012
WD_REPEATS_REGION domain-containing protein.
    
 0.724
Ccrd_010012
Uncharacterized protein.
   
  0.701
Ccrd_013528
Calcium-binding EF-hand; Belongs to the calmodulin family.
    
 0.679
Ccrd_002950
Calcium-binding EF-hand; Belongs to the calmodulin family.
    
 0.603
Ccrd_009424
Protein kinase, ATP binding site-containing protein.
  
 
0.589
Ccrd_005236
Elongation factor 4.
      
 0.577
Ccrd_021252
Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
      
 0.577
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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