Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_001051Leucine rich repeat 4. (716 aa)    
Predicted Functional Partners:
Ccrd_017202
Leucine-rich repeat-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
 
0.813
Ccrd_010012
Uncharacterized protein.
    
 0.728
Ccrd_008026
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
   
 0.720
Ccrd_006196
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
   
 0.720
Ccrd_002637
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
   
 0.720
Ccrd_007698
Glycosyltransferase 39 like protein.
   
 
 0.699
Ccrd_022717
Uncharacterized protein.
   
 
 0.699
Ccrd_011223
Leucine-rich repeat-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
  
0.698
Ccrd_002287
Concanavalin A-like lectin/glucanase, subgroup.
  
 
 
0.695
Ccrd_000072
Concanavalin A-like lectin/glucanase, subgroup.
  
 
 
0.693
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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