STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_000754Phosphoesterase. (459 aa)    
Predicted Functional Partners:
Ccrd_008480
1,3-beta-glucan synthase subunit FKS1-like, domain-1.
    
 
 0.744
Ccrd_005904
Callose synthase.
    
 
 0.744
Ccrd_004923
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
      
 0.739
Ccrd_004167
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
      
 0.739
Ccrd_023751
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
      
 0.739
Ccrd_021957
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
      
 0.739
Ccrd_008849
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
      
 0.739
Ccrd_005700
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
      
 0.739
Ccrd_002482
Uncharacterized protein.
      
 0.739
Ccrd_015626
Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond.
      
 0.739
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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