STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_000632Concanavalin A-like lectin/glucanase, subgroup. (651 aa)    
Predicted Functional Partners:
Ccrd_017892
Uncharacterized protein.
  
     0.494
Ccrd_007383
Uncharacterized protein.
  
     0.483
Ccrd_011683
Pollen Ole e 1 allergen/extensin.
  
     0.481
Ccrd_024300
Uncharacterized protein.
  
     0.479
Ccrd_001274
Uncharacterized protein.
  
     0.476
Ccrd_025957
Uncharacterized protein.
  
     0.474
Ccrd_011504
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
  
     0.470
Ccrd_019068
Uncharacterized protein.
  
     0.444
Ccrd_009225
PAK-box/P21-Rho-binding.
  
     0.441
Ccrd_010524
Uncharacterized protein.
  
     0.435
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.