Ccrd_000386 protein (Cynara cardunculus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

Ccrd_000386

Uncharacterized protein. (425 aa)

Predicted Functional Partners:

Ccrd_010012

0.548

Ccrd_011905

0.524

Ccrd_026843

0.520

Ccrd_016631

0.500

Ccrd_024599

0.499

Ccrd_008991

0.493

Ccrd_019396

0.488

Ccrd_009749

0.488

Ccrd_016643

0.477

Ccrd_010313

0.470

Your Current Organism:

Cynara cardunculus

NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ccrd_000386	Ccrd_008991	A0A103XV31	A0A118JSZ7	Uncharacterized protein.	Sde2 N-terminal domain-containing protein.	0.493
Ccrd_000386	Ccrd_009749	A0A103XV31	A0A118K791	Uncharacterized protein.	Leucine-rich repeat-containing protein.	0.488
Ccrd_000386	Ccrd_010012	A0A103XV31	A0A103YM21	Uncharacterized protein.	Uncharacterized protein.	0.548
Ccrd_000386	Ccrd_010313	A0A103XV31	A0A103YLG7	Uncharacterized protein.	Leucine-rich repeat-containing protein.	0.470
Ccrd_000386	Ccrd_011905	A0A103XV31	A0A103YII6	Uncharacterized protein.	Nucleolar pre-ribosomal-associated protein 1, N-terminal.	0.524
Ccrd_000386	Ccrd_016631	A0A103XV31	A0A103Y9K9	Uncharacterized protein.	Uncharacterized protein.	0.500
Ccrd_000386	Ccrd_016643	A0A103XV31	A0A103Y9K0	Uncharacterized protein.	Leucine-rich repeat-containing protein.	0.477
Ccrd_000386	Ccrd_019396	A0A103XV31	A0A103Y4D6	Uncharacterized protein.	Leucine-rich repeat-containing protein.	0.488
Ccrd_000386	Ccrd_024599	A0A103XV31	A0A103XC76	Uncharacterized protein.	Leucine-rich repeat-containing protein.	0.499
Ccrd_000386	Ccrd_026843	A0A103XV31	A0A103IVJ4	Uncharacterized protein.	Uncharacterized protein.	0.520
Ccrd_008991	Ccrd_000386	A0A118JSZ7	A0A103XV31	Sde2 N-terminal domain-containing protein.	Uncharacterized protein.	0.493
Ccrd_008991	Ccrd_009749	A0A118JSZ7	A0A118K791	Sde2 N-terminal domain-containing protein.	Leucine-rich repeat-containing protein.	0.493
Ccrd_008991	Ccrd_010012	A0A118JSZ7	A0A103YM21	Sde2 N-terminal domain-containing protein.	Uncharacterized protein.	0.423
Ccrd_008991	Ccrd_010313	A0A118JSZ7	A0A103YLG7	Sde2 N-terminal domain-containing protein.	Leucine-rich repeat-containing protein.	0.493
Ccrd_008991	Ccrd_016643	A0A118JSZ7	A0A103Y9K0	Sde2 N-terminal domain-containing protein.	Leucine-rich repeat-containing protein.	0.493
Ccrd_008991	Ccrd_024599	A0A118JSZ7	A0A103XC76	Sde2 N-terminal domain-containing protein.	Leucine-rich repeat-containing protein.	0.493
Ccrd_009749	Ccrd_000386	A0A118K791	A0A103XV31	Leucine-rich repeat-containing protein.	Uncharacterized protein.	0.488
Ccrd_009749	Ccrd_008991	A0A118K791	A0A118JSZ7	Leucine-rich repeat-containing protein.	Sde2 N-terminal domain-containing protein.	0.493
Ccrd_009749	Ccrd_010012	A0A118K791	A0A103YM21	Leucine-rich repeat-containing protein.	Uncharacterized protein.	0.548
Ccrd_009749	Ccrd_019396	A0A118K791	A0A103Y4D6	Leucine-rich repeat-containing protein.	Leucine-rich repeat-containing protein.	0.505

page 1 of 3

Server load: low (16%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About