Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Ccrd_000273Concanavalin A-like lectin/glucanase, subgroup. (633 aa)    
Predicted Functional Partners:
Ccrd_005474
Chromo domain-like protein.
    
 0.791
Ccrd_012659
Chromo domain-like protein.
    
 0.791
Ccrd_023480
Chromo domain-like protein.
    
 0.791
Ccrd_024198
Chromo domain-like protein.
    
 0.714
Ccrd_023250
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.714
Ccrd_010236
zf-MYST domain-containing protein.
    
 0.714
Ccrd_024295
Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant.
   
 
 0.696
Ccrd_021165
Concanavalin A-like lectin/glucanase, subgroup; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
   
   0.695
Ccrd_018204
Leucine-rich repeat-containing protein.
   
 
 0.691
Ccrd_016361
Concanavalin A-like lectin/glucanase, subgroup; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
  
0.689
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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