Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Ccrd_000116Leucine-rich repeat-containing N-terminal, type 2. (547 aa)    
Predicted Functional Partners:
Ccrd_002388
Leucine-rich repeat-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.604
Ccrd_018204
Leucine-rich repeat-containing protein.
    
  0.604
Ccrd_011223
Leucine-rich repeat-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.604
Ccrd_018971
Leucine-rich repeat-containing protein.
    
  0.599
Ccrd_025898
Concanavalin A-like lectin/glucanase, subgroup; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
   0.596
Ccrd_021835
Leucine-rich repeat-containing protein.
    
   0.596
Ccrd_015925
Leucine-rich repeat-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
   0.596
Ccrd_013103
Leucine-rich repeat-containing protein.
    
   0.596
Ccrd_009509
Protein kinase domain-containing protein.
    
   0.596
Ccrd_002255
Concanavalin A-like lectin/glucanase, subgroup.
    
   0.596
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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