STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_023823Zinc finger, Dof-type. (223 aa)    
Predicted Functional Partners:
Ccrd_017031
Uncharacterized protein.
  
 
   0.528
Ccrd_018454
DNA-binding WRKY.
  
 
  0.527
Ccrd_003399
Uncharacterized protein.
  
     0.524
Ccrd_018751
Plant specific mitochondrial import receptor subunit TOM20.
  
     0.524
Ccrd_018583
Uncharacterized protein.
  
     0.524
Ccrd_018322
Uncharacterized protein.
  
     0.520
Ccrd_002113
Mog1/PsbP, alpha/beta/alpha sandwich.
  
     0.515
Ccrd_014422
AP2/ERF domain-containing protein.
  
     0.509
Ccrd_022148
Uncharacterized protein.
  
     0.507
Ccrd_011808
Plant specific mitochondrial import receptor subunit TOM20.
  
     0.507
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.