STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_023301Uncharacterized protein. (207 aa)    
Predicted Functional Partners:
Ccrd_023528
Uncharacterized protein.
  
     0.533
Ccrd_025234
Folate receptor-like protein.
  
 
 
 0.525
Ccrd_025139
Uncharacterized protein.
  
   
 0.516
Ccrd_005736
Uncharacterized protein.
  
     0.488
Ccrd_003748
Uncharacterized protein.
  
     0.486
Ccrd_007897
Uncharacterized protein.
  
    0.482
Ccrd_022551
Photosystem I PsaG, plant.
   
  
 0.478
Ccrd_017383
Uncharacterized protein.
  
     0.473
Ccrd_025524
Photosystem I PsaG/PsaK domain-containing protein.
   
  
 0.471
Ccrd_003991
Uncharacterized protein.
  
     0.471
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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