Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccrd_010400 | Ccrd_013896 | A0A103YLB5 | A0A103YEQ4 | Phosphoglycerate kinase. | Aldolase-type TIM barrel. | 0.888 |
Ccrd_010400 | Ccrd_014382 | A0A103YLB5 | A0A103YE01 | Phosphoglycerate kinase. | Uncharacterized protein. | 0.814 |
Ccrd_010400 | Ccrd_016477 | A0A103YLB5 | A0A103Y9S7 | Phosphoglycerate kinase. | Aldolase-type TIM barrel. | 0.895 |
Ccrd_010400 | Ccrd_016767 | A0A103YLB5 | A0A103Y9B1 | Phosphoglycerate kinase. | Aldolase-type TIM barrel. | 0.907 |
Ccrd_010400 | Ccrd_017589 | A0A103YLB5 | A0A103Y7U1 | Phosphoglycerate kinase. | Aldolase-type TIM barrel. | 0.926 |
Ccrd_010400 | Ccrd_023211 | A0A103YLB5 | A0A103XX68 | Phosphoglycerate kinase. | Histidine phosphatase superfamily, clade-1. | 0.742 |
Ccrd_011449 | Ccrd_013896 | A0A103YJI2 | A0A103YEQ4 | Transcription factor GRAS; Belongs to the GRAS family. | Aldolase-type TIM barrel. | 0.806 |
Ccrd_011449 | Ccrd_014382 | A0A103YJI2 | A0A103YE01 | Transcription factor GRAS; Belongs to the GRAS family. | Uncharacterized protein. | 0.806 |
Ccrd_011449 | Ccrd_016477 | A0A103YJI2 | A0A103Y9S7 | Transcription factor GRAS; Belongs to the GRAS family. | Aldolase-type TIM barrel. | 0.806 |
Ccrd_011449 | Ccrd_016767 | A0A103YJI2 | A0A103Y9B1 | Transcription factor GRAS; Belongs to the GRAS family. | Aldolase-type TIM barrel. | 0.806 |
Ccrd_011449 | Ccrd_017589 | A0A103YJI2 | A0A103Y7U1 | Transcription factor GRAS; Belongs to the GRAS family. | Aldolase-type TIM barrel. | 0.806 |
Ccrd_011449 | Ccrd_023211 | A0A103YJI2 | A0A103XX68 | Transcription factor GRAS; Belongs to the GRAS family. | Histidine phosphatase superfamily, clade-1. | 0.732 |
Ccrd_012116 | Ccrd_013896 | A0A103YI19 | A0A103YEQ4 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Aldolase-type TIM barrel. | 0.863 |
Ccrd_012116 | Ccrd_014382 | A0A103YI19 | A0A103YE01 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Uncharacterized protein. | 0.863 |
Ccrd_012116 | Ccrd_016477 | A0A103YI19 | A0A103Y9S7 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Aldolase-type TIM barrel. | 0.863 |
Ccrd_012116 | Ccrd_016767 | A0A103YI19 | A0A103Y9B1 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Aldolase-type TIM barrel. | 0.863 |
Ccrd_012116 | Ccrd_017589 | A0A103YI19 | A0A103Y7U1 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Aldolase-type TIM barrel. | 0.853 |
Ccrd_012116 | Ccrd_023211 | A0A103YI19 | A0A103XX68 | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | Histidine phosphatase superfamily, clade-1. | 0.781 |
Ccrd_013896 | Ccrd_010400 | A0A103YEQ4 | A0A103YLB5 | Aldolase-type TIM barrel. | Phosphoglycerate kinase. | 0.888 |
Ccrd_013896 | Ccrd_011449 | A0A103YEQ4 | A0A103YJI2 | Aldolase-type TIM barrel. | Transcription factor GRAS; Belongs to the GRAS family. | 0.806 |
page 1 of 4