STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_023037Flavoprotein. (212 aa)    
Predicted Functional Partners:
Ccrd_012804
Cytidyltransferase-like domain-containing protein.
   
 0.978
Ccrd_005598
CTP_transf_like domain-containing protein.
   
 0.978
Ccrd_022794
Flavoprotein.
  
  
 
0.900
Ccrd_020537
Alkaline phosphatase-like, alpha/beta/alpha.
     
  0.900
Ccrd_022844
Uncharacterized protein.
     
 0.869
Ccrd_015325
Pantothenate kinase 2; Catalyzes the phosphorylation of pantothenate the first step in CoA biosynthesis. May play a role in the physiological regulation of the intracellular CoA concentration.
     
 0.869
Ccrd_009103
Dephospho-CoA kinase.
   
 0.851
Ccrd_017799
Phosphoribulokinase/uridine kinase.
   
 
 0.810
Ccrd_010190
Biotin--acetyl-CoA-carboxylase ligase.
  
 
 0.808
Ccrd_023686
DNA/pantothenate metabolism flavoprotein, C-terminal.
    
 0.796
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.