STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_022936Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily. (501 aa)    
Predicted Functional Partners:
Ccrd_014782
Dual specificity phosphatase, catalytic domain-containing protein.
    
 0.619
Ccrd_011949
Dual specificity phosphatase, catalytic domain-containing protein.
    
 0.619
Ccrd_012432
Dual specificity phosphatase, catalytic domain-containing protein.
    
 0.619
Ccrd_003012
WD_REPEATS_REGION domain-containing protein.
    
 0.534
Ccrd_010012
Uncharacterized protein.
   
 0.528
Ccrd_017330
Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase.
   
  
 0.525
Ccrd_006579
Calcium-binding EF-hand.
    
 0.522
Ccrd_015762
Calcium-binding EF-hand.
    
 0.522
Ccrd_002420
Uncharacterized protein.
      
 0.519
Ccrd_007838
Major facilitator superfamily domain, general substrate transporter.
      
 0.519
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.