Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccrd_000490 | Ccrd_000979 | A0A118JY85 | A0A103XU78 | CYC/TB1, R domain-containing protein. | DNA-binding pseudobarrel domain-containing protein. | 0.435 |
Ccrd_000490 | Ccrd_006870 | A0A118JY85 | A0A118JTS4 | CYC/TB1, R domain-containing protein. | Malectin_like domain-containing protein. | 0.401 |
Ccrd_000490 | Ccrd_018165 | A0A118JY85 | A0A103Y6R1 | CYC/TB1, R domain-containing protein. | No apical meristem (NAM) protein. | 0.510 |
Ccrd_000490 | Ccrd_022456 | A0A118JY85 | A0A103XYN7 | CYC/TB1, R domain-containing protein. | Lateral Root Primordium type 1, C-terminal. | 0.467 |
Ccrd_000979 | Ccrd_000490 | A0A103XU78 | A0A118JY85 | DNA-binding pseudobarrel domain-containing protein. | CYC/TB1, R domain-containing protein. | 0.435 |
Ccrd_000979 | Ccrd_006870 | A0A103XU78 | A0A118JTS4 | DNA-binding pseudobarrel domain-containing protein. | Malectin_like domain-containing protein. | 0.430 |
Ccrd_000979 | Ccrd_010569 | A0A103XU78 | A0A118K6Q0 | DNA-binding pseudobarrel domain-containing protein. | F-box domain, cyclin-like protein. | 0.440 |
Ccrd_000979 | Ccrd_011125 | A0A103XU78 | A0A103YJX5 | DNA-binding pseudobarrel domain-containing protein. | Transcription factor, TCP. | 0.483 |
Ccrd_000979 | Ccrd_013773 | A0A103XU78 | A0A124SGY6 | DNA-binding pseudobarrel domain-containing protein. | F-box domain, cyclin-like protein. | 0.467 |
Ccrd_000979 | Ccrd_018165 | A0A103XU78 | A0A103Y6R1 | DNA-binding pseudobarrel domain-containing protein. | No apical meristem (NAM) protein. | 0.493 |
Ccrd_000979 | Ccrd_022423 | A0A103XU78 | A0A103XYW6 | DNA-binding pseudobarrel domain-containing protein. | Methyltransferase. | 0.509 |
Ccrd_000979 | Ccrd_022456 | A0A103XU78 | A0A103XYN7 | DNA-binding pseudobarrel domain-containing protein. | Lateral Root Primordium type 1, C-terminal. | 0.484 |
Ccrd_000979 | Ccrd_025836 | A0A103XU78 | A0A103U592 | DNA-binding pseudobarrel domain-containing protein. | FRIGIDA-like protein; Belongs to the Frigida family. | 0.442 |
Ccrd_005368 | Ccrd_006870 | A0A124SC34 | A0A118JTS4 | CYC/TB1, R domain-containing protein. | Malectin_like domain-containing protein. | 0.457 |
Ccrd_005368 | Ccrd_018165 | A0A124SC34 | A0A103Y6R1 | CYC/TB1, R domain-containing protein. | No apical meristem (NAM) protein. | 0.496 |
Ccrd_005368 | Ccrd_022423 | A0A124SC34 | A0A103XYW6 | CYC/TB1, R domain-containing protein. | Methyltransferase. | 0.476 |
Ccrd_005368 | Ccrd_022456 | A0A124SC34 | A0A103XYN7 | CYC/TB1, R domain-containing protein. | Lateral Root Primordium type 1, C-terminal. | 0.472 |
Ccrd_006870 | Ccrd_000490 | A0A118JTS4 | A0A118JY85 | Malectin_like domain-containing protein. | CYC/TB1, R domain-containing protein. | 0.401 |
Ccrd_006870 | Ccrd_000979 | A0A118JTS4 | A0A103XU78 | Malectin_like domain-containing protein. | DNA-binding pseudobarrel domain-containing protein. | 0.430 |
Ccrd_006870 | Ccrd_005368 | A0A118JTS4 | A0A124SC34 | Malectin_like domain-containing protein. | CYC/TB1, R domain-containing protein. | 0.457 |
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