STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_022040Cupredoxin. (178 aa)    
Predicted Functional Partners:
Ccrd_011350
No apical meristem (NAM) protein.
  
   
 0.582
Ccrd_017073
Uncharacterized protein.
  
 
  0.557
Ccrd_026860
DUF632 domain-containing protein.
  
 
  0.556
Ccrd_020334
Concanavalin A-like lectin/glucanase superfamily.
  
 
  0.551
Ccrd_014638
Uncharacterized protein.
  
 
  0.550
Ccrd_008495
No apical meristem (NAM) protein.
  
 
  0.549
Ccrd_025522
Uncharacterized protein.
  
 
  0.536
Ccrd_020275
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.
  
 
  0.534
Ccrd_024504
Uncharacterized protein.
  
     0.533
Ccrd_020329
Concanavalin A-like lectin/glucanase superfamily.
  
 
  0.530
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.