STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_021844Armadillo repeat-containing protein 3 and Serine/threonine-protein kinase CTR1. (146 aa)    
Predicted Functional Partners:
Ccrd_017690
GAF domain-containing protein.
   
 0.954
Ccrd_006659
Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway.
   
 0.927
Ccrd_008295
Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway.
   
 0.927
Ccrd_014245
Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway.
   
 0.926
Ccrd_016883
Protein kinase, ATP binding site-containing protein; Belongs to the protein kinase superfamily.
    
  0.913
Ccrd_018442
Armadillo repeat-containing protein 3 and Serine/threonine-protein kinase CTR1.
  
  
 
0.900
Ccrd_009071
GAF domain-containing protein.
   
 0.561
Ccrd_002537
CheY-like superfamily.
   
 0.561
Ccrd_022828
Oleosin.
  
     0.524
Ccrd_017603
Amino acid transporter, transmembrane.
    
 0.519
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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