STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_021837Uncharacterized protein. (575 aa)    
Predicted Functional Partners:
Ccrd_010887
BHLH domain-containing protein.
  
     0.503
Ccrd_017547
Uncharacterized protein.
  
     0.500
Ccrd_022710
Nucleotide-binding, alpha-beta plait.
  
     0.459
Ccrd_001627
Uncharacterized protein.
  
     0.458
Ccrd_004727
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
  
     0.455
Ccrd_011810
Uncharacterized protein.
  
     0.450
Ccrd_016359
Uncharacterized protein.
  
     0.449
Ccrd_021734
Lateral organ boundaries domain-containing protein.
  
     0.448
Ccrd_006228
Glutamine-Leucine-Glutamine, QLQ.
  
     0.442
Ccrd_007661
Chromo domain-like protein.
  
     0.442
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.