STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_021612Uncharacterized protein. (218 aa)    
Predicted Functional Partners:
Ccrd_004010
Ribonuclease P/MRP, p29 subunit.
   
 0.993
Ccrd_026743
Polymerase/histidinol phosphatase-like protein.
   
 0.989
Ccrd_025262
Uncharacterized protein.
    
 
 0.974
Ccrd_000263
Kri1-like, C-terminal.
   
   0.902
Ccrd_022167
DNA/RNA-binding protein Alba-like protein.
    
 0.683
Ccrd_016460
DNA/RNA-binding protein Alba-like protein.
    
 0.683
Ccrd_013885
Thioredoxin-like fold.
    
 0.683
Ccrd_013886
DNA/RNA-binding protein Alba-like protein.
    
 0.683
Ccrd_023575
Ribonuclease P/MRP protein subunit.
     
 0.683
Ccrd_014271
DNA/RNA-binding protein Alba-like protein.
    
 0.683
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.