STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_021223Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (523 aa)    
Predicted Functional Partners:
Ccrd_025573
Aldolase-type TIM barrel.
  
 0.998
Ccrd_001202
Amidohydrolase 1.
  
 
 0.992
Ccrd_006480
Hydantoinase/dihydropyrimidinase.
  
 0.974
Ccrd_008465
Metal-dependent hydrolase, composite domain-containing protein.
  
 0.974
Ccrd_025924
Cytochrome b5, heme-binding site-containing protein.
  
 0.948
Ccrd_025680
Eukaryotic molybdopterin oxidoreductase.
  
 0.948
Ccrd_025681
Cytochrome b5, heme-binding site-containing protein; Belongs to the cytochrome b5 family.
  
 0.948
Ccrd_025678
Oxidoreductase, molybdopterin-binding domain-containing protein.
  
 0.948
Ccrd_025679
Cytochrome b5-like heme/steroid binding domain-containing protein.
  
 0.948
Ccrd_025682
Cytochrome b5-like heme/steroid binding domain-containing protein.
  
 0.948
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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