STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_019838Glyco_hyd_65N_2 domain-containing protein. (613 aa)    
Predicted Functional Partners:
Ccrd_007238
Uncharacterized protein.
 
 
 0.977
Ccrd_015984
Aldolase-type TIM barrel; Belongs to the glycosyl hydrolase 27 family.
  
   
 0.740
Ccrd_018832
Cytochrome P450.
      
 0.673
Ccrd_005007
Cytochrome P450; Belongs to the cytochrome P450 family.
      
 0.672
Ccrd_000570
Carotenoid oxygenase.
      
 0.581
Ccrd_015430
Alpha-galactosidase.
  
   
 0.531
Ccrd_006714
D-galactoside/L-rhamnose binding SUEL lectin domain-containing protein.
   
  
 0.528
Ccrd_006723
D-galactoside/L-rhamnose binding SUEL lectin domain-containing protein.
   
  
 0.528
Ccrd_014578
Alpha-galactosidase.
  
   
 0.527
Ccrd_005781
Pentatricopeptide repeat-containing protein.
      
 0.523
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.