STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_019661Disulfide isomerase; Belongs to the protein disulfide isomerase family. (430 aa)    
Predicted Functional Partners:
Ccrd_024295
Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant.
  
 0.723
Ccrd_008307
Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant.
  
 0.693
Ccrd_008026
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
   
 0.620
Ccrd_006196
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
   
 0.620
Ccrd_002637
Heat shock protein 70, conserved site-containing protein; Belongs to the heat shock protein 70 family.
   
 0.620
Ccrd_019599
Endoplasmic reticulum oxidoreductin 1.
    
 0.584
Ccrd_011025
Endoplasmic reticulum oxidoreductin 1.
    
 0.584
Ccrd_022377
Calreticulin.
   
 0.575
Ccrd_022284
Calreticulin.
   
 0.575
Ccrd_013767
Calreticulin.
   
 0.575
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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