Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccrd_010172 | Ccrd_019341 | A0A118K6Z5 | A0A103Y4J4 | Myc-type, basic helix-loop-helix (BHLH) domain-containing protein. | Transcription factor GRAS; Belongs to the GRAS family. | 0.676 |
Ccrd_010802 | Ccrd_011931 | A0A118K6K4 | A0A103YIH3 | Root cap. | ANF_receptor domain-containing protein. | 0.505 |
Ccrd_010802 | Ccrd_015709 | A0A118K6K4 | A0A124SGC5 | Root cap. | Cupredoxin. | 0.484 |
Ccrd_010802 | Ccrd_017272 | A0A118K6K4 | A0A103Y8F0 | Root cap. | Uncharacterized protein. | 0.500 |
Ccrd_010802 | Ccrd_019194 | A0A118K6K4 | A0A103Y4P7 | Root cap. | Uncharacterized protein. | 0.449 |
Ccrd_010802 | Ccrd_019341 | A0A118K6K4 | A0A103Y4J4 | Root cap. | Transcription factor GRAS; Belongs to the GRAS family. | 0.430 |
Ccrd_011132 | Ccrd_017272 | A0A103YJZ7 | A0A103Y8F0 | No apical meristem (NAM) protein. | Uncharacterized protein. | 0.404 |
Ccrd_011132 | Ccrd_019341 | A0A103YJZ7 | A0A103Y4J4 | No apical meristem (NAM) protein. | Transcription factor GRAS; Belongs to the GRAS family. | 0.511 |
Ccrd_011518 | Ccrd_019341 | A0A124SHN4 | A0A103Y4J4 | Pectinesterase inhibitor. | Transcription factor GRAS; Belongs to the GRAS family. | 0.426 |
Ccrd_011931 | Ccrd_010802 | A0A103YIH3 | A0A118K6K4 | ANF_receptor domain-containing protein. | Root cap. | 0.505 |
Ccrd_011931 | Ccrd_015709 | A0A103YIH3 | A0A124SGC5 | ANF_receptor domain-containing protein. | Cupredoxin. | 0.527 |
Ccrd_011931 | Ccrd_017272 | A0A103YIH3 | A0A103Y8F0 | ANF_receptor domain-containing protein. | Uncharacterized protein. | 0.489 |
Ccrd_011931 | Ccrd_019194 | A0A103YIH3 | A0A103Y4P7 | ANF_receptor domain-containing protein. | Uncharacterized protein. | 0.471 |
Ccrd_011931 | Ccrd_019341 | A0A103YIH3 | A0A103Y4J4 | ANF_receptor domain-containing protein. | Transcription factor GRAS; Belongs to the GRAS family. | 0.424 |
Ccrd_011931 | Ccrd_025935 | A0A103YIH3 | A0A103TBV9 | ANF_receptor domain-containing protein. | Uncharacterized protein. | 0.426 |
Ccrd_015709 | Ccrd_010802 | A0A124SGC5 | A0A118K6K4 | Cupredoxin. | Root cap. | 0.484 |
Ccrd_015709 | Ccrd_011931 | A0A124SGC5 | A0A103YIH3 | Cupredoxin. | ANF_receptor domain-containing protein. | 0.527 |
Ccrd_015709 | Ccrd_017272 | A0A124SGC5 | A0A103Y8F0 | Cupredoxin. | Uncharacterized protein. | 0.506 |
Ccrd_015709 | Ccrd_019341 | A0A124SGC5 | A0A103Y4J4 | Cupredoxin. | Transcription factor GRAS; Belongs to the GRAS family. | 0.417 |
Ccrd_015709 | Ccrd_025935 | A0A124SGC5 | A0A103TBV9 | Cupredoxin. | Uncharacterized protein. | 0.422 |
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