STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_019306Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
Ccrd_008917
Uncharacterized protein.
   
 0.969
Ccrd_007895
DUF4378 domain-containing protein.
   
 0.969
Ccrd_006856
DUF4378 domain-containing protein.
   
 0.969
Ccrd_000654
DUF4378 domain-containing protein.
   
 0.969
Ccrd_002607
Nucleoside diphosphate kinase.
    
 0.959
Ccrd_021214
Nucleoside diphosphate kinase.
    
 0.959
Ccrd_016656
Guanylate kinase.
   
 
 0.957
Ccrd_009496
Galactose oxidase/kelch, beta-propeller.
   
 
 0.956
Ccrd_025489
Adenylate kinase; Belongs to the adenylate kinase family.
     
 0.952
Ccrd_007479
Adenylate kinase; Belongs to the adenylate kinase family.
     
 0.952
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.