STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_018921Uncharacterized protein. (152 aa)    
Predicted Functional Partners:
Ccrd_012775
Uncharacterized protein.
  
    0.516
Ccrd_007657
Uncharacterized protein.
  
     0.514
Ccrd_001753
Uncharacterized protein.
  
     0.487
Ccrd_000168
Uncharacterized protein.
  
     0.461
Ccrd_018927
Uncharacterized protein.
  
    0.446
Ccrd_026117
Phox/Bem1p.
  
     0.433
Ccrd_021248
F-box domain-containing protein.
  
     0.424
Ccrd_010162
Importin N-terminal domain-containing protein.
  
     0.419
Ccrd_019065
Vacuolar protein sorting-associated protein 13 domain-containing protein.
  
     0.417
Ccrd_021423
Ubiquitinyl hydrolase 1.
  
     0.415
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.