STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_018413NAD(P)-binding domain-containing protein. (343 aa)    
Predicted Functional Partners:
Ccrd_006558
NADH:ubiquinone oxidoreductase-like, 20kDa subunit.
   
 0.929
Ccrd_005511
NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial.
   
 0.919
Ccrd_020965
Uncharacterized protein.
   
 0.899
Ccrd_017367
NADH-ubiquinone oxidoreductase, subunit 10.
   
 0.884
Ccrd_005142
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.880
Ccrd_019245
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.880
Ccrd_006519
CHCH-like protein.
   
 0.871
Ccrd_006593
CHCH-like protein.
   
 0.871
Ccrd_014080
Zinc finger, CHCC-type.
   
 0.867
Ccrd_018606
2Fe-2S ferredoxin-type domain-containing protein; Belongs to the complex I 75 kDa subunit family.
   
 0.856
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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