STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_017664Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms. (218 aa)    
Predicted Functional Partners:
Ccrd_000287
tRNA delta(2)-isopentenylpyrophosphate transferase.
      
 0.739
Ccrd_017364
Helicase, C-terminal.
    
 0.565
Ccrd_003963
Ribosomal protein S16.
   
  0.536
Ccrd_004229
Ribosomal protein S6.
    
  0.532
Ccrd_026140
ARID/BRIGHT DNA-binding domain-containing protein.
    
 0.524
Ccrd_021412
High mobility group (HMG) box domain-containing protein.
    
 0.524
Ccrd_014320
Uncharacterized protein.
    
 0.524
Ccrd_021411
ARID/BRIGHT DNA-binding domain-containing protein.
    
 0.524
Ccrd_019347
ARID/BRIGHT DNA-binding domain-containing protein.
    
 0.524
Ccrd_013328
ARID/BRIGHT DNA-binding domain-containing protein.
    
 0.524
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
Server load: low (18%) [HD]