STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_017404AP2/ERF domain-containing protein. (276 aa)    
Predicted Functional Partners:
Ccrd_007481
AP2/ERF domain-containing protein.
  
     0.512
Ccrd_019307
Plant specific mitochondrial import receptor subunit TOM20.
  
     0.511
Ccrd_011808
Plant specific mitochondrial import receptor subunit TOM20.
  
     0.503
Ccrd_003399
Uncharacterized protein.
  
     0.495
Ccrd_001026
Zinc finger, Dof-type.
  
     0.494
Ccrd_012088
AP2/ERF domain-containing protein.
  
     0.491
Ccrd_005000
Zinc finger, Dof-type.
  
    0.488
Ccrd_015755
Zinc finger, Dof-type.
  
    0.481
Ccrd_020720
Zinc finger, Dof-type.
  
     0.472
Ccrd_023823
Zinc finger, Dof-type.
  
    0.470
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.