STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_016563Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (393 aa)    
Predicted Functional Partners:
Ccrd_004337
Peroxisome biogenesis factor 10.
    
 0.998
Ccrd_022544
Peroxisomal targeting signal 1 receptor.
   
 0.997
Ccrd_017066
Peroxin-3.
   
 0.987
Ccrd_015313
Peroxisomal membrane protein 14.
    
 0.984
Ccrd_002409
Uncharacterized protein.
    
 0.982
Ccrd_006031
Pex19 protein.
    
 0.982
Ccrd_023118
AAA+ ATPase domain-containing protein.
    
 0.968
Ccrd_008882
Peroxisomal biogenesis factor 11.
   
 0.940
Ccrd_015076
Peroxisomal biogenesis factor 11.
   
 0.940
Ccrd_008538
G-protein beta WD-40 repeat-containing protein.
     
 0.940
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.