STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_014475Uncharacterized protein. (1323 aa)    
Predicted Functional Partners:
Ccrd_002401
DNA mismatch repair protein MutS, clamp.
     
 0.692
Ccrd_019389
DNA mismatch repair protein MutS, core.
     
 0.692
Ccrd_015900
DNA/RNA helicase, DEAD/DEAH box type, N-terminal.
      
 0.682
Ccrd_014474
Uncharacterized protein.
      
 0.678
Ccrd_022799
CENP-S complex, centromere protein X.
      
 0.600
Ccrd_023935
DNA/RNA helicase, DEAD/DEAH box type, N-terminal.
      
 0.595
Ccrd_025340
Actin-binding FH2.
  
  
 0.563
Ccrd_012911
DNA mismatch repair, conserved site-containing protein.
  
  
 0.541
Ccrd_012395
AAA+ ATPase domain-containing protein.
    
 
 0.528
Ccrd_020174
AAA+ ATPase domain-containing protein; Belongs to the RecA family.
      
 0.524
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.