STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_013932Ribosomal protein L14, bacterial-type; Belongs to the universal ribosomal protein uL14 family. (166 aa)    
Predicted Functional Partners:
Ccrd_000928
Ribosomal protein L21.
  
 
 0.987
Ccrd_006821
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.986
Ccrd_001512
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.986
Ccrd_015375
Ribosomal protein L19.
   
 
 0.986
Ccrd_009195
Ribosomal protein L33.
  
 
 0.986
Ccrd_023178
Ribosomal protein L4 domain-containing protein.
  
 0.985
Ccrd_018522
Ribosomal protein L15, bacterial-type.
  
 0.985
Ccrd_010885
Ribosomal protein L9.
  
 
 0.985
Ccrd_020461
Ribosomal protein L10e/L16; Belongs to the universal ribosomal protein uL16 family.
 
 0.971
Ccrd_019279
Uncharacterized protein.
  
 0.965
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.