STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_013858Phosphotransferase. (480 aa)    
Predicted Functional Partners:
Ccrd_015057
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.985
Ccrd_022082
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.971
PFK-3
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
   
 
 0.970
Ccrd_018587
Phosphofructokinase.
   
 
 0.968
Ccrd_021287
Carbohydrate kinase PfkB; Belongs to the carbohydrate kinase PfkB family.
     
 0.966
PFK
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
   
 
 0.961
PFK-2
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
   
 
 0.959
Ccrd_016224
Alpha-D-phosphohexomutase, alpha/beta/alpha domain I.
   
 
 0.952
Ccrd_000219
Alpha-D-phosphohexomutase, alpha/beta/alpha domain I.
   
 
 0.952
Ccrd_011524
Concanavalin A-like lectin/glucanase superfamily; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.951
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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