STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_013513Cupredoxin. (231 aa)    
Predicted Functional Partners:
Ccrd_021061
Uncharacterized protein.
  
   
 0.604
Ccrd_020984
Uncharacterized protein.
  
   
 0.603
Ccrd_024626
Uncharacterized protein.
  
   
 0.599
Ccrd_005800
Inositol-tetrakisphosphate 1-kinase.
      
 0.574
Ccrd_020918
Uncharacterized protein.
  
   
 0.545
Ccrd_019634
FAS1 domain-containing protein.
  
   
 0.538
Ccrd_010982
FAS1 domain-containing protein.
  
   
 0.534
Ccrd_007996
Lipase, class 3.
  
     0.521
Ccrd_005491
Gibberellin regulated protein.
  
     0.509
Ccrd_002573
F-box domain, cyclin-like protein.
  
     0.508
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.