Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccrd_006567 | Ccrd_012830 | A0A103XIJ3 | A0A103YGR1 | Photolyase/cryptochrome alpha/beta domain-containing protein. | GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. | 0.529 |
Ccrd_006567 | Ccrd_014353 | A0A103XIJ3 | A0A103YDZ8 | Photolyase/cryptochrome alpha/beta domain-containing protein. | Cryptochrome C-terminal. | 0.920 |
Ccrd_006567 | GATA | A0A103XIJ3 | A0A118K323 | Photolyase/cryptochrome alpha/beta domain-containing protein. | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.682 |
Ccrd_012830 | Ccrd_006567 | A0A103YGR1 | A0A103XIJ3 | GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. | Photolyase/cryptochrome alpha/beta domain-containing protein. | 0.529 |
Ccrd_012830 | Ccrd_014353 | A0A103YGR1 | A0A103YDZ8 | GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. | Cryptochrome C-terminal. | 0.429 |
Ccrd_012830 | Ccrd_015626 | A0A103YGR1 | A0A118K3I5 | GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. | Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. | 0.463 |
Ccrd_012830 | Ccrd_023222 | A0A103YGR1 | A0A103XX57 | GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. | Cryptochrome C-terminal. | 0.429 |
Ccrd_012830 | GATA | A0A103YGR1 | A0A118K323 | GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.650 |
Ccrd_014353 | Ccrd_006567 | A0A103YDZ8 | A0A103XIJ3 | Cryptochrome C-terminal. | Photolyase/cryptochrome alpha/beta domain-containing protein. | 0.920 |
Ccrd_014353 | Ccrd_012830 | A0A103YDZ8 | A0A103YGR1 | Cryptochrome C-terminal. | GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. | 0.429 |
Ccrd_014353 | GATA | A0A103YDZ8 | A0A118K323 | Cryptochrome C-terminal. | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.668 |
Ccrd_015626 | Ccrd_012830 | A0A118K3I5 | A0A103YGR1 | Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. | GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. | 0.463 |
Ccrd_023222 | Ccrd_012830 | A0A103XX57 | A0A103YGR1 | Cryptochrome C-terminal. | GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. | 0.429 |
Ccrd_023222 | GATA | A0A103XX57 | A0A118K323 | Cryptochrome C-terminal. | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.668 |
GATA | Ccrd_006567 | A0A118K323 | A0A103XIJ3 | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | Photolyase/cryptochrome alpha/beta domain-containing protein. | 0.682 |
GATA | Ccrd_012830 | A0A118K323 | A0A103YGR1 | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily. | 0.650 |
GATA | Ccrd_014353 | A0A118K323 | A0A103YDZ8 | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | Cryptochrome C-terminal. | 0.668 |
GATA | Ccrd_023222 | A0A118K323 | A0A103XX57 | Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | Cryptochrome C-terminal. | 0.668 |