STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_012351WD40 repeat-containing protein. (210 aa)    
Predicted Functional Partners:
Ccrd_025523
Cleavage/polyadenylation specificity factor, A subunit, C-terminal.
    
 0.912
Ccrd_019241
G-protein beta WD-40 repeat-containing protein.
     
 0.887
Ccrd_014931
G-protein beta WD-40 repeat-containing protein.
     
 0.886
Ccrd_014094
Protein kinase, ATP binding site-containing protein.
   
 
 0.808
Ccrd_025624
Uncharacterized protein.
   
 
 0.778
Ccrd_024366
Pentatricopeptide repeat-containing protein.
   
 
 0.778
Ccrd_005661
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
   
 
 0.778
Ccrd_017590
BHLH domain-containing protein.
   
 
 0.778
Ccrd_016824
Protein kinase, catalytic domain-containing protein.
   
 
 0.778
Ccrd_011652
Protein kinase, catalytic domain-containing protein.
   
 
 0.778
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.