STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_011717Uncharacterized protein. (125 aa)    
Predicted Functional Partners:
Ccrd_014224
Actin-binding FH2.
  
   
 0.563
Ccrd_018529
Prolamin-like domain-containing protein.
  
     0.538
Ccrd_022357
Uncharacterized protein.
  
     0.538
Ccrd_020904
Uncharacterized protein.
  
     0.538
Ccrd_006975
Uncharacterized protein.
  
     0.531
Ccrd_021326
Uncharacterized protein.
  
     0.530
Ccrd_011526
Uncharacterized protein.
  
     0.523
Ccrd_025627
F-box domain, cyclin-like protein.
  
     0.520
Ccrd_001291
Uncharacterized protein.
  
     0.519
Ccrd_023163
Prolamin-like domain-containing protein.
  
     0.516
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.