STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_010998Uncharacterized protein. (1161 aa)    
Predicted Functional Partners:
Ccrd_011318
Uncharacterized protein.
  
     0.510
Ccrd_021096
Uncharacterized protein.
  
     0.482
Ccrd_014565
Tetratricopeptide-like helical.
  
     0.479
Ccrd_011904
JmjC domain-containing protein.
  
     0.478
Ccrd_009310
Uncharacterized protein.
  
     0.478
Ccrd_025013
Uncharacterized protein.
  
     0.474
Ccrd_017866
Uncharacterized protein.
  
     0.468
Ccrd_013068
Uncharacterized protein.
  
     0.467
Ccrd_017891
Uncharacterized protein.
  
     0.465
Ccrd_003710
Uncharacterized protein.
  
     0.464
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.