STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_009464Mitochondrial fission 1 protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. (163 aa)    
Predicted Functional Partners:
Ccrd_017066
Peroxin-3.
     
 0.831
Ccrd_023125
Uncharacterized protein; Belongs to the GST superfamily.
    
 0.819
Ccrd_008864
Peroxisomal membrane protein PEX16.
     
 0.809
Ccrd_016563
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.792
Ccrd_015313
Peroxisomal membrane protein 14.
     
 0.789
Ccrd_008882
Peroxisomal biogenesis factor 11.
    
 0.775
Ccrd_015076
Peroxisomal biogenesis factor 11.
    
 0.775
Ccrd_002409
Uncharacterized protein.
    
 0.769
Ccrd_006031
Pex19 protein.
    
 0.769
Ccrd_000508
Uncharacterized protein.
      
 0.723
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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