STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_009458Uncharacterized protein. (374 aa)    
Predicted Functional Partners:
Ccrd_008715
Galectin domain-containing protein.
      
 0.680
Ccrd_008312
Concanavalin A-like lectin/glucanase superfamily.
      
 0.549
Ccrd_007307
Glycosyl transferase, family 29; Belongs to the glycosyltransferase 29 family.
      
 0.524
Ccrd_021676
Glycosyl transferase, family 29; Belongs to the glycosyltransferase 29 family.
      
 0.524
Ccrd_016129
Concanavalin A-like lectin/glucanase superfamily.
      
 0.524
Ccrd_006235
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
    
 
 0.523
Ccrd_006236
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
    
 
 0.523
Ccrd_021552
Uncharacterized protein.
      
 0.499
Ccrd_006715
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
    
 
 0.434
Ccrd_014943
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
    
 
 0.434
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.