STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_009214Rho termination factor, N-terminal. (372 aa)    
Predicted Functional Partners:
Ccrd_024690
Nucleotide-binding, alpha-beta plait.
  
 
 
 0.628
Ccrd_020991
Importin N-terminal domain-containing protein.
      
 0.525
Ccrd_024575
Rho_N domain-containing protein.
      
 0.522
Ccrd_022610
Uncharacterized protein.
  
     0.520
Ccrd_015016
Uncharacterized protein.
  
     0.519
Ccrd_020071
Uncharacterized protein.
  
     0.517
Ccrd_016467
Uncharacterized protein.
  
     0.504
Ccrd_019782
Uncharacterized protein.
  
     0.500
Ccrd_005525
Glutamine-Leucine-Glutamine, QLQ.
  
     0.498
Ccrd_019437
Uncharacterized protein.
 
     0.498
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.