STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_009029CP12 domain-containing protein. (122 aa)    
Predicted Functional Partners:
Ccrd_008204
Phosphoribulokinase.
   
 
 0.958
Ccrd_001185
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 
 0.933
Ccrd_014342
Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 
 0.855
Ccrd_001896
Uncharacterized protein.
  
 
 
 0.583
Ccrd_011369
Glyceraldehyde 3-phosphate dehydrogenase, active site-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 
 0.526
Ccrd_025489
Adenylate kinase; Belongs to the adenylate kinase family.
      
 0.524
Ccrd_005110
Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 
 0.523
Ccrd_000064
Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 
 0.523
Ccrd_015440
Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 
 0.523
Ccrd_015939
Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 
 0.523
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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