STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_024554Uncharacterized protein. (383 aa)    
Predicted Functional Partners:
Ccrd_001713
7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK.
  
 
 0.982
Ccrd_013388
Dihydroxy-acid/6-phosphogluconate dehydratase.
  
 0.907
Ccrd_006987
Uncharacterized protein.
  
 0.907
Ccrd_011131
Aminotransferase, class IV.
  
  
 
0.903
Ccrd_011412
Folylpolyglutamate synthetase.
    
 0.843
Ccrd_025950
Aldehyde dehydrogenase, C-terminal.
  
 
 0.837
Ccrd_016778
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
 
 0.837
Ccrd_011743
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
 
 0.837
Ccrd_015471
Acetolactate synthase.
  
 0.832
Ccrd_012776
Thiamine pyrophosphate enzyme, central domain-containing protein; Belongs to the TPP enzyme family.
  
 0.795
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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