STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_025102Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
Ccrd_026627
Glutathione S-transferase/chloride channel, C-terminal.
   
 
 0.922
Ccrd_018657
Glutathione S-transferase/chloride channel, C-terminal.
   
 
 0.922
Ccrd_006994
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.886
Ccrd_013373
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.886
Ccrd_025256
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.867
Ccrd_020719
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.852
Ccrd_006397
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.847
Ccrd_001142
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.837
Ccrd_007896
Asparagine synthase.
  
  
 0.826
Ccrd_025607
Aminoacyl-tRNA synthetase, class II.
  
  
 0.810
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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