STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_026186TPX2, C-terminal domain-containing protein. (355 aa)    
Predicted Functional Partners:
Ccrd_015521
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
  
     0.486
Ccrd_006763
Pectinesterase inhibitor.
  
     0.471
Ccrd_003213
Myc-type, basic helix-loop-helix (BHLH) domain-containing protein.
  
     0.469
Ccrd_015591
Uncharacterized protein.
  
     0.456
Ccrd_005806
Homeodomain-like protein.
  
     0.454
Ccrd_018749
Uncharacterized protein.
  
     0.453
Ccrd_003463
DUF4005 domain-containing protein.
  
     0.452
Ccrd_008917
Uncharacterized protein.
  
     0.450
Ccrd_000784
Uncharacterized protein.
  
     0.450
Ccrd_014524
Uncharacterized protein.
  
     0.447
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.