STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_007501No apical meristem (NAM) protein. (332 aa)    
Predicted Functional Partners:
Ccrd_026904
Uncharacterized protein.
  
     0.526
Ccrd_014595
Homeodomain-like protein.
  
     0.520
Ccrd_001373
Uncharacterized protein.
  
     0.515
Ccrd_016753
Zinc finger, C2H2.
  
     0.510
Ccrd_012800
Uncharacterized protein.
  
     0.509
Ccrd_007346
Uncharacterized protein.
  
     0.508
Ccrd_001977
Homeodomain-like protein.
  
     0.507
Ccrd_002641
Homeodomain-like protein.
  
     0.503
Ccrd_015135
Glyoxal_oxid_N domain-containing protein.
  
     0.503
Ccrd_026405
F-box domain, cyclin-like protein.
  
     0.502
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.