Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccrd_000419 | Ccrd_006436 | A0A103XV61 | A0A118JTZ1 | Mediator complex, subunit Med27. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.674 |
Ccrd_000488 | Ccrd_000790 | A0A103XV24 | A0A103XUJ2 | Ornithine aminotransferase. | Ureohydrolase; Belongs to the arginase family. | 0.927 |
Ccrd_000488 | Ccrd_006436 | A0A103XV24 | A0A118JTZ1 | Ornithine aminotransferase. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.562 |
Ccrd_000790 | Ccrd_000488 | A0A103XUJ2 | A0A103XV24 | Ureohydrolase; Belongs to the arginase family. | Ornithine aminotransferase. | 0.927 |
Ccrd_000790 | Ccrd_002575 | A0A103XUJ2 | A0A124SCZ3 | Ureohydrolase; Belongs to the arginase family. | Uncharacterized protein. | 0.923 |
Ccrd_000790 | Ccrd_006436 | A0A103XUJ2 | A0A118JTZ1 | Ureohydrolase; Belongs to the arginase family. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.696 |
Ccrd_000790 | Ccrd_006780 | A0A103XUJ2 | A0A103XIC5 | Ureohydrolase; Belongs to the arginase family. | Nitroreductase-like protein. | 0.429 |
Ccrd_000790 | Ccrd_020335 | A0A103XUJ2 | A0A118K0G4 | Ureohydrolase; Belongs to the arginase family. | Aminotransferase class-III. | 0.891 |
Ccrd_000790 | Ccrd_022700 | A0A103XUJ2 | A0A103XY57 | Ureohydrolase; Belongs to the arginase family. | Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.927 |
Ccrd_000790 | Ccrd_023663 | A0A103XUJ2 | A0A103XWC9 | Ureohydrolase; Belongs to the arginase family. | Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.891 |
Ccrd_002575 | Ccrd_000790 | A0A124SCZ3 | A0A103XUJ2 | Uncharacterized protein. | Ureohydrolase; Belongs to the arginase family. | 0.923 |
Ccrd_002575 | Ccrd_006436 | A0A124SCZ3 | A0A118JTZ1 | Uncharacterized protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.562 |
Ccrd_003460 | Ccrd_006436 | A0A103XPE2 | A0A118JTZ1 | TspO/MBR-related protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.557 |
Ccrd_006436 | Ccrd_000419 | A0A118JTZ1 | A0A103XV61 | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | Mediator complex, subunit Med27. | 0.674 |
Ccrd_006436 | Ccrd_000488 | A0A118JTZ1 | A0A103XV24 | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | Ornithine aminotransferase. | 0.562 |
Ccrd_006436 | Ccrd_000790 | A0A118JTZ1 | A0A103XUJ2 | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | Ureohydrolase; Belongs to the arginase family. | 0.696 |
Ccrd_006436 | Ccrd_002575 | A0A118JTZ1 | A0A124SCZ3 | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | Uncharacterized protein. | 0.562 |
Ccrd_006436 | Ccrd_003460 | A0A118JTZ1 | A0A103XPE2 | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | TspO/MBR-related protein. | 0.557 |
Ccrd_006436 | Ccrd_006780 | A0A118JTZ1 | A0A103XIC5 | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | Nitroreductase-like protein. | 0.682 |
Ccrd_006436 | Ccrd_015681 | A0A118JTZ1 | A0A103YBE1 | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | ATP-dependent helicase, C-terminal. | 0.668 |
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