STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccrd_007373Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (391 aa)    
Predicted Functional Partners:
Ccrd_021301
Auxin responsive SAUR protein.
  
     0.534
Ccrd_021302
Auxin responsive SAUR protein.
  
     0.533
Ccrd_021304
Auxin responsive SAUR protein.
  
     0.533
Ccrd_017564
Auxin responsive SAUR protein.
  
     0.531
Ccrd_026403
Auxin responsive SAUR protein.
  
     0.528
Ccrd_017573
Uncharacterized protein.
  
     0.527
Ccrd_001916
Auxin responsive SAUR protein.
  
     0.520
Ccrd_002406
Armadillo-like helical.
    
 0.509
Ccrd_017560
Auxin responsive SAUR protein.
  
     0.499
Ccrd_015982
Lipase, GDSL; Belongs to the 'GDSL' lipolytic enzyme family.
  
   
 0.445
Your Current Organism:
Cynara cardunculus
NCBI taxonomy Id: 59895
Other names: C. cardunculus var. scolymus, Cynara cardunculus Scolymus Group, Cynara cardunculus subsp. scolymus, Cynara cardunculus subsp. scolymus (L.) Hayek, Cynara cardunculus var. scolymus, Cynara cardunculus var. scolymus (L.) Fiori, Cynara scolymus, Cynara scolymus L., artichoke, globe artichoke
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